{"id":533,"date":"2026-04-27T09:47:18","date_gmt":"2026-04-27T15:47:18","guid":{"rendered":"https:\/\/labs.agsci.colostate.edu\/stewartlab\/?page_id=533"},"modified":"2026-08-13T14:30:02","modified_gmt":"2026-08-13T20:30:02","slug":"pubs","status":"publish","type":"page","link":"https:\/\/labs.agsci.colostate.edu\/stewartlab\/pubs\/","title":{"rendered":"Publications"},"content":{"rendered":"\n\n
\n\n \n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n
Temporal and spatial proximity to wildfire is associated with species-specific patterns of phoresy by plant-pathogenic nematodes (Bursaphelenchus xylophilus<\/i>) in\u00a0\u2026<\/a><\/p>\n
HA Nolan, TS Davis, JE Stewart<\/div>\n
Fire Ecology<\/div>\n<\/td>\n
<\/td>\n2026<\/span><\/td>\n<\/tr>\n
Emerging Threats in Southern U.S. Pine Plantations: Temporal Dynamics of Fungal Communities and the Impact of\u00a0Lecanosticta acicola<\/i><\/a><\/p>\n
CR Cornell, RO Olatinwo, O Kozhar, K Wharton, JE Stewart<\/div>\n
Microbial Ecology<\/div>\n<\/td>\n
<\/td>\n2026<\/span><\/td>\n<\/tr>\n
Tree Killer, Qu’est-ce Que C’est? Insights From Forest Pathogen Genomes<\/a><\/p>\n
RC Hamelin, JE Stewart, D Hadziabdic<\/div>\n
Annual Review of Phytopathology 64<\/div>\n<\/td>\n
<\/td>\n2026<\/span><\/td>\n<\/tr>\n
Development and Characterization of\u00a0Pleurotus Fossulatus<\/i>\u00a0Mycelium-Based Composites for Biodesigned Textile Applications<\/a><\/p>\n
MN Davis, JS Greenberger, J Heacock, JE Stewart, YV Li<\/div>\n
ACS Sustainable Chemistry & Engineering 14 (24), 11068-11079<\/div>\n<\/td>\n
<\/td>\n2026<\/span><\/td>\n<\/tr>\n
Characterizing fungal community shifts associated with\u00a0Amauromyza karli<\/i>\u00a0Hendel (Diptera: Agromyzidae) infestation in quinoa<\/a><\/p>\n
N Panwar, JE Stewart, JR Ibarra Caballero, A Szczepaniec<\/div>\n
Frontiers in Plant Science 17, 1741091<\/div>\n<\/td>\n
1<\/a><\/td>\n2026<\/span><\/td>\n<\/tr>\n
Genomic and Transcriptomic Analyses Reveal Mechanisms Associated with Pathogenesis of\u00a0Fusarium annulatum<\/i>\u00a0and\u00a0F. commune<\/i>\u00a0in Nursery-Grown Conifer\u00a0\u2026<\/a><\/p>\n
JT Dobbs, MS Kim, NB Klopfenstein, JE Stewart<\/div>\n
Phytopathology\u00ae 116 (5), 751-765<\/div>\n<\/td>\n
1<\/a><\/td>\n2026<\/span><\/td>\n<\/tr>\n
Future climate will not save high-elevation white pines<\/a><\/p>\n
SL Malone, AW Schoettle, KS Burns, HSJ Kearns, JE Stewart, …<\/div>\n
Communications Earth & Environment 7 (1), 351<\/div>\n<\/td>\n
1<\/a><\/td>\n2026<\/span><\/td>\n<\/tr>\n
Spatiotemporal patterns of airborne microbial communities in forest and grassland ecosystems<\/a><\/p>\n
CR Cornell, AE Miller, M Nieto-Caballero, KS Burns, SM Kreidenweis, …<\/div>\n
Mbio 17 (2), e03057-25<\/div>\n<\/td>\n
<\/td>\n2026<\/span><\/td>\n<\/tr>\n
Differential Infection and Colonisation of Needle Age Classes by\u00a0Cronartium ribicola<\/i><\/a><\/p>\n
AE Miller, AW Schoettle, JRI Caballero, T Teegardin, JE Stewart<\/div>\n
Forest Pathology 56 (1), e70065<\/div>\n<\/td>\n
<\/td>\n2026<\/span><\/td>\n<\/tr>\n
Beyond survival: microbial dispersion via aerosolization as an evolutionary trait<\/a><\/p>\n
EA Kraus, A Gillison, R Rodriguez, MMF Thomas-Gatel, S Golon, …<\/div>\n
Frontiers in Microbiology 17, 1923366<\/div>\n<\/td>\n
<\/td>\n2026<\/span><\/td>\n<\/tr>\n
Population genomics in invasion research: a primer for ecologists.<\/a><\/p>\n
O Kozhar, JE Stewart, RA Hufbauer<\/div>\n
Invasion Genomics, 13-29<\/div>\n<\/td>\n
<\/td>\n2025<\/span><\/td>\n<\/tr>\n
Soluble solids content-based fruit maturity affects postharvest fruit quality by mediating metabolic alterations in cold-stored \u2018Autumn Sense\u2019hardy kiwifruit<\/a><\/p>\n
H Park, HJ Eo, CW Kim, JE Stewart, U Lee, J Lee<\/div>\n
Food Chemistry: X, 103373<\/div>\n<\/td>\n
4<\/a><\/td>\n2025<\/span><\/td>\n<\/tr>\n
Epitypification of\u00a0Armillaria solidipes<\/i>, a cause of Armillaria root disease in North America<\/a><\/p>\n
V Anton\u00edn, AJ Fitz Axen, JR Ibarra Caballero, JJ Worrall, SB Marchetti, …<\/div>\n
Mycologia 117 (6), 1077-1087<\/div>\n<\/td>\n
2<\/a><\/td>\n2025<\/span><\/td>\n<\/tr>\n
High-Quality Draft Genome for\u00a0Armillaria mexicana<\/i>, a Recently Described Species in North America<\/a><\/p>\n
JE Stewart, MS Kim, JR Ibarra Caballero, PI Bennett, JW Hanna, …<\/div>\n
Genome Biology and Evolution 17 (10), evaf185<\/div>\n<\/td>\n
1<\/a><\/td>\n2025<\/span><\/td>\n<\/tr>\n
Myco-Ed: Mycological curriculum for education and discovery<\/a><\/p>\n
S Branco, PG Avis, K Barry, S Bates, GM Cobi\u00e1n, EG Dow, S Gremillion, …<\/div>\n
PLoS Pathogens 21 (7), e1013303<\/div>\n<\/td>\n
2<\/a><\/td>\n2025<\/span><\/td>\n<\/tr>\n
RustMapper: White Pine blister rust risk across high elevation forests in the western United States<\/a><\/p>\n
SL Malone, AW Schoettle, KS Burns, HSJ Kearns, JE Stewart, …<\/div>\n
Scientific Data 12 (1), 1046<\/div>\n<\/td>\n
2<\/a><\/td>\n2025<\/span><\/td>\n<\/tr>\n
Transcriptome analysis of Dryadomyces quercus-mongolicae, a fungus associated with Korean oak wilt disease that causes oak mortality in South Korea<\/a><\/p>\n
H Park, JRI Caballero, JE Stewart, NB Klopfenstein, U Lee, MS Kim<\/div>\n
The Plant Pathology Journal 41 (3), 409<\/div>\n<\/td>\n
3<\/a><\/td>\n2025<\/span><\/td>\n<\/tr>\n
Acacia koa<\/i>\u00a0seedling disease tolerance and vigor driven by breeding orchard size<\/a><\/p>\n
N Fumia, N Dudley, T Jones, J Dobbs, J Stewart, M Kantar<\/div>\n
Frontiers in Plant Science 16, 1544491<\/div>\n<\/td>\n
<\/td>\n2025<\/span><\/td>\n<\/tr>\n
Differential regulation of the phenylpropanoid pathway highly contributes to the susceptibility of chilling-induced necrotic peel disorders in cold-stored hardy kiwifruit<\/a><\/p>\n
H Park, HJ Eo, CW Kim, JE Stewart, U Lee, J Lee<\/div>\n
Postharvest Biology and Technology 221, 113337<\/div>\n<\/td>\n
4<\/a><\/td>\n2025<\/span><\/td>\n<\/tr>\n
New Zealand Myrtaceae are susceptible to a strain from the\u00a0Eucalyptus<\/i>\u00a0biotype of\u00a0Austropuccinia psidii<\/i>\u00a0present in South America<\/a><\/p>\n
J Soewarto, C P\u00e9rez, M Bartlett, C Somchit, B Ganley, R Sutherland, …<\/div>\n
Biological Invasions 27 (2), 72<\/div>\n<\/td>\n
2<\/a><\/td>\n2025<\/span><\/td>\n<\/tr>\n
First Report of Diplodia Shoot Blight and Canker Disease Caused by\u00a0Diplodia sapinea<\/i>\u00a0on Ponderosa Pine in Colorado, U.S.A.<\/a><\/p>\n
M McKee, J Dobbs, N Tisserat, JT Blodgett, KS Burns, JE Stewart<\/div>\n
Plant Disease 109 (2), 495<\/div>\n<\/td>\n
1<\/a><\/td>\n2025<\/span><\/td>\n<\/tr>\n
Characterizing phenotype variants of\u00a0Cercosporidium personatum<\/i>, causal agent of peanut late leaf spot disease, their morphology, genetics and metabolites<\/a><\/p>\n
RS Arias, EG Cantonwine, VA Orner, TE Walk, AN Massa, JE Stewart, …<\/div>\n
Scientific Reports 15 (1), 1405<\/div>\n<\/td>\n
1<\/a><\/td>\n2025<\/span><\/td>\n<\/tr>\n
Defining the Pathobiomes Associated with Drippy Blight in Colorado and Drippy Nut in California<\/a><\/p>\n
H Raymond, RA Sitz, IS Pearse, JRI Caballero, BM Lalande, JE Stewart<\/div>\n
PhytoFrontiers\u2122 4 (4), 734-745<\/div>\n<\/td>\n
<\/td>\n2024<\/span><\/td>\n<\/tr>\n
Patterns of occurrence, phenology, and phylogeny of\u00a0Phloeosinus punctatus LeConte<\/i>\u00a0(Coleoptera: Curculionidae, Scolytinae) in giant sequoia<\/a><\/p>\n
NE Foote, GG Foote, N Comai, JR Ibarra Caballero, JE Stewart, …<\/div>\n
Environmental Entomology 53 (6), 1183-1196<\/div>\n<\/td>\n
5<\/a><\/td>\n2024<\/span><\/td>\n<\/tr>\n
Physiological disorders in cold-stored \u2018Autumn Sense\u2019hardy kiwifruit depend on the storage temperature and the modulation of targeted metabolites<\/a><\/p>\n
H Park, HJ Eo, CW Kim, JE Stewart, U Lee, J Lee<\/div>\n
Food Chemistry 460, 140730<\/div>\n<\/td>\n
17<\/a><\/td>\n2024<\/span><\/td>\n<\/tr>\n
Fire-associated microbial shifts in soils of western conifer forests with Armillaria root disease<\/a><\/p>\n
AJ Fitz Axen, MS Kim, NB Klopfenstein, S Ashiglar, JW Hanna, P Bennett, …<\/div>\n
Applied and Environmental Microbiology 90 (11), e01312-24<\/div>\n<\/td>\n
2<\/a><\/td>\n2024<\/span><\/td>\n<\/tr>\n
Development and Evaluation of Real-Time Quantitative PCR Assays for Detection of\u00a0Phellinus noxius<\/i>\u00a0Causing Brown Root Rot Disease<\/a><\/p>\n
TY Liu, CH Chen, YC Ko, ZC Wu, TZ Liao, HH Lee, IJ Tsai, TT Chang, …<\/div>\n
Plant Disease 108 (11), 3288-3299<\/div>\n<\/td>\n
1<\/a><\/td>\n2024<\/span><\/td>\n<\/tr>\n
First report of Austropuccinia psidii on Syzygium buxifolium grown as indoor bonsai in Europe<\/a><\/p>\n
B Ruffner, L Beenken, Q Kupper, J Mittelstrass, P Schuler, JE Stewart, …<\/div>\n
New Disease Reports 50 (2)<\/div>\n<\/td>\n
4<\/a><\/td>\n2024<\/span><\/td>\n<\/tr>\n
Comparative Genomics of Conifer\u2010Associated\u00a0Fusarium<\/i>\u00a0spp.<\/a><\/p>\n
JT Dobbs, MS Kim, NB Klopfenstein, JE Stewart<\/div>\n
Forest Pathology 54 (5), e12888<\/div>\n<\/td>\n
2<\/a><\/td>\n2024<\/span><\/td>\n<\/tr>\n
Assessing performance of simplified bioassays for soil-borne pathogens in smallholder systems of western Kenya<\/a><\/p>\n
JC Mutai, JE Stewart, B Medvecky, JT Dobbs, SJ Vanek, J Ojiem, …<\/div>\n
Frontiers in Plant Science 15, 1389285<\/div>\n<\/td>\n
9<\/a><\/td>\n2024<\/span><\/td>\n<\/tr>\n
First report of leaf spot caused by\u00a0Neopestalotiopsis<\/i>\u00a0and\u00a0Calonectria<\/i>\u00a0species on\u00a0Areca ipot<\/i>\u00a0seedlings in Luzon, Philippines<\/a><\/p>\n
RAD Mastrili, JR Ibarra Caballero, PL Malabrigo Jr, JE Stewart, JP Ata<\/div>\n
Forest Pathology 54 (4), e12883<\/div>\n<\/td>\n
3<\/a><\/td>\n2024<\/span><\/td>\n<\/tr>\n
Potato soil core microbiomes are regionally variable across the continental United States<\/a><\/p>\n
SA Klasek, JE Crants, T Abbas, K Ashley, ML Bolton, M Celovsky, …<\/div>\n
Phytobiomes Journal 8 (2), 168-178<\/div>\n<\/td>\n
12<\/a><\/td>\n2024<\/span><\/td>\n<\/tr>\n
Genomic and Transcriptomic Comparisons of the Twig Blight Pathogen,\u00a0Passalora sequoiae<\/i>, with\u00a0Mycosphaerellaceae<\/i>\u00a0Foliar and Conifer Pathogens<\/a><\/p>\n
JT Dobbs, JRI Caballero, JP Ata, E Babiker, WE Copes, JE Stewart<\/div>\n
Phytopathology\u00ae 114 (4), 732-742<\/div>\n<\/td>\n
3<\/a><\/td>\n2024<\/span><\/td>\n<\/tr>\n
Needle pathogens of\u00a0Rhytismataceae<\/i>: Current knowledge and research opportunities for conifer foliar diseases<\/a><\/p>\n
JP Ata, KS Burns, JE Stewart<\/div>\n
Forest Pathology 54 (1), e12851<\/div>\n<\/td>\n
7<\/a><\/td>\n2024<\/span><\/td>\n<\/tr>\n
Distribution of Cronartium x flexili, an interspecific hybrid of two fungal tree rust pathogens, in subalpine forest ecosystems of western USA<\/a><\/p>\n
O Kozhar, KS Burns, AW Schoettle, JE Stewart<\/div>\n
Fungal Biology 128 (1), 1578-1589<\/div>\n<\/td>\n
4<\/a><\/td>\n2024<\/span><\/td>\n<\/tr>\n
Assessing historical and contemporary rates of white pine blister rust incidence in naturally regenerated stands of western white pine for the prioritization of restoration\u00a0\u2026<\/a><\/p>\n
JE Stewart, MS Kim, MV Warwell, JW Hanna, PJ Zambino, GI McDonald, …<\/div>\n
In: Brooks, Rachel K., compiler. Proceedings of the 68th Western\u00a0\u2026<\/div>\n<\/td>\n
<\/td>\n2024<\/span><\/td>\n<\/tr>\n
Phylogenetic analyses allow species-level recognition of\u00a0Leptographium wageneri<\/i>\u00a0varieties that cause black stain root disease of conifers in western North America<\/a><\/p>\n
D Choi, TC Harrington, DC Shaw, JE Stewart, NB Klopfenstein, …<\/div>\n
Frontiers in Plant Science 14, 1286157<\/div>\n<\/td>\n
7<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
Characterization of Foliar Fungal Endophyte Communities from White Pine Blister Rust Resistant and Susceptible\u00a0Pinus flexilis<\/i>\u00a0in Natural Stands in the Southern\u00a0\u2026<\/a><\/p>\n
JP Ata, AW Schoettle, RA Sitz, JRI Caballero, CT Holtz, Z Abdo, …<\/div>\n
Phytobiomes Journal 7 (2), 259-269<\/div>\n<\/td>\n
8<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
Population genomic analysis of an emerging pathogen\u00a0Lonsdalea quercina<\/i>\u00a0affecting various species of oaks in western North America<\/a><\/p>\n
O Kozhar, RA Sitz, R Woyda, L Legg, JR Ibarra Caballero, IS Pearse, …<\/div>\n
Scientific Reports 13 (1), 14852<\/div>\n<\/td>\n
4<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
Mycobiota associated with anthracnose and dieback symptoms on\u00a0Theobroma cacao<\/i>\u00a0L. in M\u00e9rida State, Venezuela<\/a><\/p>\n
SRM Castillo, S Woodward, NB Klopfenstein, MS Kim, JE Stewart<\/div>\n
Summa Phytopathologica 49, e245874<\/div>\n<\/td>\n
5<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
The role of stress factors in severity of Cytospora plurivora in greenhouse and field plantings of thirteen peach (Prunus persica) cultivars<\/a><\/p>\n
ST Miller, S Wright, JE Stewart<\/div>\n
Frontiers in Plant Science 14, 1228493<\/div>\n<\/td>\n
3<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
Nutritional Profile and Ecological Interactions of Yeast Symbionts Associated with North American Spruce Beetle (Dendroctonus rufipennis<\/i>) Yeast Symbionts of\u00a0\u2026<\/a><\/p>\n
TS Davis, JE Stewart, C Clark, C Van Buiten<\/div>\n
Microbial Ecology 86 (2), 1268-1280<\/div>\n<\/td>\n
3<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
Translocation of Fungicides and Their Efficacy in Controlling\u00a0Phellinus noxius<\/i>, the Cause of Brown Root Rot Disease<\/a><\/p>\n
TZ Liao, YH Chen, JN Tsai, C Chao, TP Huang, CF Hong, ZC Wu, IJ Tsai, …<\/div>\n
Plant disease 107 (7), 2039-2053<\/div>\n<\/td>\n
12<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
Field ready: Development of a rapid LAMP\u2010based colorimetric assay for the causal agent of white pine blister rust,\u00a0Cronartium ribicola<\/i><\/a><\/p>\n
O Kozhar, JR Ibarra Caballero, KS Burns, JE Stewart<\/div>\n
Forest Pathology 53 (3), e12814<\/div>\n<\/td>\n
9<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
First draft genome and transcriptome of\u00a0Cercosporidium personatum<\/i>, causal agent of late leaf spot disease of peanut<\/a><\/p>\n
RS Arias, JT Dobbs, JE Stewart, EG Cantonwine, VA Orner, VS Sobolev, …<\/div>\n
BMC Research Notes 16 (1), 58<\/div>\n<\/td>\n
4<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
NemaTaxa: A new taxonomic database for analysis of nematode community data<\/a><\/p>\n
H Baker, J Ibarra Caballero, C Gleason, C Jahn, C Hesse, JE Stewart, …<\/div>\n
Phytobiomes Journal<\/div>\n<\/td>\n
23<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
Genomic Comparisons of Two\u00a0Armillaria<\/i>\u00a0Species with Different Ecological Behaviors and Their Associated Soil Microbial Communities<\/a><\/p>\n
JRI Caballero, BM Lalande, JW Hanna, NB Klopfenstein, MS Kim, …<\/div>\n
Microbial ecology 85 (2), 708-729<\/div>\n<\/td>\n
27<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
Interactions between White Pine Blister Rust, Bark Beetles, and Climate over Time Indicate Vulnerabilities to Limber Pine Health<\/a><\/p>\n
KS Burns, WT Tinkham, KA Leddy, AW Schoettle, W Jacobi, JE Stewart<\/div>\n
Frontiers in Forests and Global Change 6, 59<\/div>\n<\/td>\n
14<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
Fusarioid community diversity associated with conifer seedlings in forest nurseries across the contiguous USA<\/a><\/p>\n
JT Dobbs, MS Kim, GJ Reynolds, N Wilhelmi, K Dumroese, …<\/div>\n
Frontiers in Plant Science 14, 125<\/div>\n<\/td>\n
18<\/a><\/td>\n2023<\/span><\/td>\n<\/tr>\n
Colletotrichum<\/i>\u00a0spp. and other fungi associated with anthracnose on\u00a0Coffea arabica<\/i>\u00a0L. in M\u00e9rida State, Venezuela<\/a><\/p>\n
SRM Castillo, S Miller, J Stewart<\/div>\n
Summa Phytopathologica 48 (3), 99-111<\/div>\n<\/td>\n
7<\/a><\/td>\n2022<\/span><\/td>\n<\/tr>\n
First report of Colletotrichum siamense associated with anthracnose on Theobroma cacao fruits in Venezuela<\/a><\/p>\n
SR Mohali-Castillo, JE Stewart<\/div>\n
New Disease Reports 46 (2), e12131<\/div>\n<\/td>\n
5<\/a><\/td>\n2022<\/span><\/td>\n<\/tr>\n
Development of PCR-based markers for the identification and detection of Lophodermella needle cast pathogens on Pinus contorta var. latifolia and P. flexilis<\/a><\/p>\n
JP Ata, KS Burns, SB Marchetti, JJ Worrall, SJ Mondo, JE Stewart<\/div>\n
Journal of microbiological methods 200, 106546<\/div>\n<\/td>\n
4<\/a><\/td>\n2022<\/span><\/td>\n<\/tr>\n
Transitions of foliar mycobiota community and transcriptome in response to pathogenic conifer needle interactions<\/a><\/p>\n
JP Ata, JR Ibarra Caballero, Z Abdo, SJ Mondo, JE Stewart<\/div>\n
Scientific Reports 12 (1), 7832<\/div>\n<\/td>\n
15<\/a><\/td>\n2022<\/span><\/td>\n<\/tr>\n
First Report of\u00a0Biscogniauxia mediterranea<\/i>\u00a0on\u00a0Quercus emoryi<\/i>\u00a0in Southern Arizona<\/a><\/p>\n
SA Wright, BM Lalande, N Wilhelmi, JE Stewart<\/div>\n
Plant Disease 106 (4), 1305<\/div>\n<\/td>\n
4<\/a><\/td>\n2022<\/span><\/td>\n<\/tr>\n
Genetic and Phenotypic Characterization of the Fungal Pathogen\u00a0Cytospora plurivora<\/i>\u00a0from Western Colorado Peach Orchards and the Development of\u00a0a ddPCR\u00a0\u2026<\/a><\/p>\n
JE Stewart, ST Miller, FA Zink, JI Caballero, LR Tembrock<\/div>\n
Phytopathology\u00ae 112 (4), 917-928<\/div>\n<\/td>\n
12<\/a><\/td>\n2022<\/span><\/td>\n<\/tr>\n
Long evolutionary history of an emerging fungal pathogen of diverse tree species in eastern Asia, Australia, and the Pacific Islands<\/a><\/p>\n
O Kozhar, MS Kim, J Ibarra Caballero, NB Klopfenstein, PG Cannon, …<\/div>\n
Molecular Ecology<\/div>\n<\/td>\n
8<\/a><\/td>\n2022<\/span><\/td>\n<\/tr>\n
Brown root rot disease caused by Phellinus noxius in US-affiliated Pacific Islands<\/a><\/p>\n
PG Cannon, JE Stewart, CL Chung<\/div>\n
Gen. Tech. Rep. PNW-GTR-1006. Portland, OR: US Department of Agriculture\u00a0\u2026<\/div>\n<\/td>\n
5<\/a><\/td>\n2022<\/span><\/td>\n<\/tr>\n
Forest Pathology in Changing Climate<\/a><\/p>\n
D Hadziabdic, R Hamelin, JE Stewart, C Villari<\/div>\n
Frontiers in Forests and Global Change, 206<\/div>\n<\/td>\n
5<\/a><\/td>\n2022<\/span><\/td>\n<\/tr>\n
Armillaria root diseases of diverse trees in wide-spread global regions<\/a><\/p>\n
MS Kim, R Heinzelmann, F Labb\u00e9, Y Ota, RD El\u00edas-Rom\u00e1n, MB Pildain, …<\/div>\n
Forest microbiology, 361-378<\/div>\n<\/td>\n
31<\/a><\/td>\n2022<\/span><\/td>\n<\/tr>\n
Recovery Plan for Scots Pine Blister Rust Caused by\u00a0Cronartium pini<\/i><\/a><\/p>\n
MS Kim, J Hantula, J Kaitera, PJ Zambino, S Woodward, BA Richardson, …<\/div>\n
Plant Health Progress 23 (1), 105-130<\/div>\n<\/td>\n
25<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Predicting present and future suitable climate spaces (potential distributions) for an Armillaria root disease pathogen (Armillaria solidipes) and its host, Douglas-fir\u00a0\u2026<\/a><\/p>\n
MS Kim, JW Hanna, JE Stewart, MV Warwell, GI McDonald, …<\/div>\n
Frontiers in Forests and Global Change 4, 740994<\/div>\n<\/td>\n
29<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Disease detectives: mapping the risk of invasive forest pathogens under a changing climate.<\/a><\/p>\n
A Watts, MS Kim, N Klopfenstein, J Stewart<\/div>\n
<\/div>\n<\/td>\n
<\/td>\n2021<\/span><\/td>\n<\/tr>\n
Fusarium<\/i>\u00a0spp. diversity associated with symptomatic\u00a0Acacia koa<\/i>\u00a0in Hawai\u02bdi<\/a><\/p>\n
JT Dobbs, MS Kim, NS Dudley, TC Jones, A Yeh, RK Dumroese, …<\/div>\n
Forest Pathology 51 (5), e12713<\/div>\n<\/td>\n
9<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Soil fertility interactions with\u00a0Sinorhizobium<\/i>-legume symbiosis in a simulated Martian regolith; effects on nitrogen content and plant health<\/a><\/p>\n
F Harris, J Dobbs, D Atkins, JA Ippolito, JE Stewart<\/div>\n
PLoS One 16 (9), e0257053<\/div>\n<\/td>\n
22<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Exploring fungicides and sealants for management of Cytospora plurivora infections in western Colorado peach production systems<\/a><\/p>\n
ST Miller, D Sterle, IS Minas, JE Stewart<\/div>\n
Crop Protection 146, 105654<\/div>\n<\/td>\n
12<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Desarmillaria caespitosa<\/i>, a North American vicariant of\u00a0D. tabescens<\/i><\/a><\/p>\n
V Anton\u00edn, JE Stewart, RM Ortiz, MS Kim, P Bonello, M Tom\u0161ovsk\u00fd, …<\/div>\n
Mycologia 113 (4), 776-790<\/div>\n<\/td>\n
15<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Molecular characterization and phylogenetic analyses of Lophodermella needle pathogens (Rhytismataceae) on Pinus species in the USA and Europe<\/a><\/p>\n
JP Ata, KS Burns, S Marchetti, IA Munck, L Beenken, JJ Worrall, …<\/div>\n
PeerJ 9, e11435<\/div>\n<\/td>\n
11<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Dietary supplementation with phytochemicals improves diversity and abundance of honey bee gut microbiota<\/a><\/p>\n
C Geldert, Z Abdo, JE Stewart, A HS<\/div>\n
Journal of Applied Microbiology 130 (5), 1705-1720<\/div>\n<\/td>\n
61<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Eastern Black Walnut (Juglans nigra<\/i>\u00a0L.) Originating From Native Range Varies in Their Response to Inoculation With\u00a0Geosmithia morbida<\/i><\/a><\/p>\n
RA Sitz, EK Luna, J Ibarra Caballero, NA Tisserat, WS Cranshaw, …<\/div>\n
Frontiers in Forests and Global Change 4, 627911<\/div>\n<\/td>\n
14<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Invasive species response to natural and anthropogenic disturbance<\/a><\/p>\n
SE Meyer, MA Callaham Jr, JE Stewart, SD Warren<\/div>\n
Invasive species in forests and rangelands of the United States: A\u00a0\u2026<\/div>\n<\/td>\n
129<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Evaluation of the translocation of fungicides and their efficacy for control of brown root rot disease of trees<\/a><\/p>\n
TZ Liao, YH Chen, JN Tsai, C Chao, TP Huang, CF Hong, IJ Tsai, HH Lee, …<\/div>\n
Phytopathology<\/div>\n<\/td>\n
<\/td>\n2021<\/span><\/td>\n<\/tr>\n
The Future of Forest Pathology in North America<\/a><\/p>\n
D Hadziabdic, PE Bonello, R Hamelin, J Juzwik, B Moltzan, D Rizzo, …<\/div>\n
Frontiers in Forests and Global Change, 168<\/div>\n<\/td>\n
8<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Calonectria vigiensis<\/i>\u00a0sp. nov. (Hypocreales, Nectriaceae) associated with dieback and sudden-death symptoms of\u00a0Theobroma cacao<\/i>\u00a0from M\u00e9rida state, Venezuela<\/a><\/p>\n
SR Mohali, JE Stewart<\/div>\n
Botany 99 (11), 683-693<\/div>\n<\/td>\n
20<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Pathobiome and microbial communities associated with forest tree root diseases<\/a><\/p>\n
JE Stewart, MS Kim, B Lalande, NB Klopfenstein<\/div>\n
Forest microbiology, 277-292<\/div>\n<\/td>\n
28<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Probability of occurrence and phenology of pine wilt disease transmission by insect vectors in the Rocky Mountains<\/a><\/p>\n
DH Atkins, TS Davis, JE Stewart<\/div>\n
Ecological Solutions and Evidence 2 (1), e12044<\/div>\n<\/td>\n
18<\/a><\/td>\n2021<\/span><\/td>\n<\/tr>\n
Draft genome assembly of\u00a0Passalora sequoiae<\/i>\u00a0a needle blight pathogen on Leyland cypress<\/a><\/p>\n
WE Copes, J Ibarra Caballero, E Babiker, JE Stewart, VA Orner, …<\/div>\n
BMC Research Notes 13 (1), 505<\/div>\n<\/td>\n
1<\/a><\/td>\n2020<\/span><\/td>\n<\/tr>\n
Whole genome analysis of the koa wilt pathogen (Fusarium oxysporum<\/i>\u00a0f. sp.\u00a0koae<\/i>) and the development of molecular tools for early detection and monitoring<\/a><\/p>\n
JT Dobbs, MS Kim, NS Dudley, NB Klopfenstein, A Yeh, RD Hauff, …<\/div>\n
BMC genomics 21 (1), 764<\/div>\n<\/td>\n
26<\/a><\/td>\n2020<\/span><\/td>\n<\/tr>\n
Pathogenicity and distribution of two species of Cytospora on Populus tremuloides in portions of the Rocky Mountains and Midwest in the United States<\/a><\/p>\n
MM Dudley, NA Tisserat, WR Jacobi, J Negr\u00f3n, JE Stewart<\/div>\n
Forest Ecology and Management 468, 118168<\/div>\n<\/td>\n
21<\/a><\/td>\n2020<\/span><\/td>\n<\/tr>\n
Subalpine fir mortality in Colorado is associated with stand density, warming climates and interactions among fungal diseases and the western balsam bark beetle<\/a><\/p>\n
BM Lalande, K Hughes, WR Jacobi, WT Tinkham, R Reich, JE Stewart<\/div>\n
Forest Ecology and Management 466, 118133<\/div>\n<\/td>\n
40<\/a><\/td>\n2020<\/span><\/td>\n<\/tr>\n
Genome comparison and transcriptome analysis of the invasive brown root rot pathogen, Phellinus noxius, from different geographic regions reveals potential enzymes associated\u00a0\u2026<\/a><\/p>\n
JR Ibarra Caballero, JP Ata, KA Leddy, TC Glenn, TJ Kieran, …<\/div>\n
Fungal biology 124 (2), 144-154<\/div>\n<\/td>\n
18<\/a><\/td>\n2020<\/span><\/td>\n<\/tr>\n
Molecular characterization of Fusarium species associated with damping-off of conifer seedlings in tree nurseries<\/a><\/p>\n
JE Stewart, JT Dobbs, S Fraedrich, GJ Reynolds, K Dumroese, …<\/div>\n
In: Reynolds, Gregory J.; Wilhelmi, Nicholas P.; Palacios, Patsy, compilers\u00a0\u2026<\/div>\n<\/td>\n
5<\/a><\/td>\n2020<\/span><\/td>\n<\/tr>\n
The need for rapid molecular diagnostics to distinguish biotypes of the myrtle rust pathogen (Austropuccinia psidii)<\/a><\/p>\n
RA Sitz, MS Kim, PG Cannon, AC Alfenas, M Glen, AR McTaggart, …<\/div>\n
In: Reynolds, Gregory J.; Wilhelmi, Nicholas P.; Palacios, Patsy, compilers\u00a0\u2026<\/div>\n<\/td>\n
<\/td>\n2020<\/span><\/td>\n<\/tr>\n
Bioclimatic modeling of Armillaria species in southeastern Alaska, including potentially invasive Armillaria species under changing climate<\/a><\/p>\n
JW Hanna, RL Mulvey, MS Kim, JE Stewart, BC Bright, MV Warwell, …<\/div>\n
In: Reynolds, Gregory J.; Wilhelmi, Nicholas P.; Palacios, Patsy, compilers\u00a0\u2026<\/div>\n<\/td>\n
1<\/a><\/td>\n2020<\/span><\/td>\n<\/tr>\n
Phylogenetic and population genetic analyses reveal three distinct lineages of the invasive brown root-rot pathogen, Phellinus noxius, and bioclimatic modeling predicts\u00a0\u2026<\/a><\/p>\n
JE Stewart, MS Kim, Y Ota, N Sahashi, JW Hanna, M Akiba, JP Ata, …<\/div>\n
European Journal of Plant Pathology, 1-16<\/div>\n<\/td>\n
16<\/a><\/td>\n2020<\/span><\/td>\n<\/tr>\n
Responses of Engelmann spruce to inoculation with\u00a0Leptographium abietinum<\/i>, a symbiotic fungus of the North American spruce beetle<\/a><\/p>\n
JE Stewart, FL Harris, K Otto, TS Davis<\/div>\n
Canadian Journal of Forest Research 50 (5), 465-472<\/div>\n<\/td>\n
7<\/a><\/td>\n2020<\/span><\/td>\n<\/tr>\n
Invasions of gladiolus rust in North America are caused by a widely-distributed clone of Uromyces transversalis<\/a><\/p>\n
JA DeLong, JE Stewart, A Valencia-Bot\u00edn, KF Pedley, JW Buck, …<\/div>\n
PeerJ 7, e7986<\/div>\n<\/td>\n
3<\/a><\/td>\n2019<\/span><\/td>\n<\/tr>\n
Responses of bacterial and fungal community structure to different rates of 1, 3-dichloropropene fumigation<\/a><\/p>\n
Y Zeng, Z Abdo, A Charkowski, JE Stewart, K Frost<\/div>\n
Phytobiomes Journal 3 (3), 212-223<\/div>\n<\/td>\n
16<\/a><\/td>\n2019<\/span><\/td>\n<\/tr>\n
Insects Visiting Drippy Blight Diseased Red Oak Trees Are Contaminated with the Pathogenic Bacterium\u00a0Lonsdalea quercina<\/i><\/a><\/p>\n
RA Sitz, VM Aquino, NA Tisserat, WS Cranshaw, JE Stewart<\/div>\n
Plant disease 103 (8), 1940-1946<\/div>\n<\/td>\n
19<\/a><\/td>\n2019<\/span><\/td>\n<\/tr>\n
Preventive Fungicidal Control of\u00a0Cytospora leucostoma<\/i>\u00a0in Peach Orchards in Colorado<\/a><\/p>\n
ST Miller, KL Otto, D Sterle, IS Minas, JE Stewart<\/div>\n
Plant disease 103 (6), 1138-1147<\/div>\n<\/td>\n
37<\/a><\/td>\n2019<\/span><\/td>\n<\/tr>\n
Molecular identification and characterization of root diseases in the western USA<\/a><\/p>\n
RA Sitz, JW Hanna, JE Stewart, MS Kim, PG Cannon, BW Oblinger, …<\/div>\n
Notes, 3-7<\/div>\n<\/td>\n
<\/td>\n2019<\/span><\/td>\n<\/tr>\n
Transcriptome analysis of a powdery mildew pathogen (Podosphaera pannosa<\/i>) infecting\u00a0Eucalyptus urophylla<\/i>: De novo assembly, expression profiling and\u00a0\u2026<\/a><\/p>\n
NR Fonseca, J Ibarra Caballero, MS Kim, JE Stewart, LMS Guimar\u00e3es, …<\/div>\n
Forest Pathology 49 (3), e12508<\/div>\n<\/td>\n
6<\/a><\/td>\n2019<\/span><\/td>\n<\/tr>\n
Phytophthora urerae<\/i>\u00a0sp. nov., a new clade 1c relative of the Irish famine pathogen\u00a0Phytophthora infestans<\/i>\u00a0from South America<\/a><\/p>\n
NJ Gr\u00fcnwald, GA Forbes, W Perez\u2010Barrera, JE Stewart, VJ Fieland, …<\/div>\n
Plant Pathology 68 (3), 557-565<\/div>\n<\/td>\n
7<\/a><\/td>\n2019<\/span><\/td>\n<\/tr>\n
Armillaria altimontana is associated with healthy western white pine (Pinus monticola): Potential in situ biological control of the Armillaria root disease pathogen, A. solidipes<\/a><\/p>\n
MV Warwell, GI McDonald, JW Hanna, MS Kim, BM Lalande, JE Stewart, …<\/div>\n
Forests 10 (4), 294<\/div>\n<\/td>\n
16<\/a><\/td>\n2019<\/span><\/td>\n<\/tr>\n
Genomic comparisons of the laurel wilt pathogen, Raffaelea lauricola, and related tree pathogens highlight an arsenal of pathogenicity related genes.<\/a><\/p>\n
JR Ibarra Caballero, J Jeon, YH Lee, S Fraedrich, NB Klopfenstein, …<\/div>\n
Fungal genetics and biology<\/div>\n<\/td>\n
26<\/a><\/td>\n2019<\/span><\/td>\n<\/tr>\n
Development of tools for early detection, monitoring and management of the koa wilt pathogen (Fusarium oxysporum f. sp. koae) in Hawai\u00edi<\/a><\/p>\n
JT Dobbs, NS Dudley, TC Jones, PG Cannon, RD Hauff, JE Stewart<\/div>\n
In: Cleaver, C.; Palacious, P., compilers. Proceedings of the 65th annual\u00a0\u2026<\/div>\n<\/td>\n
<\/td>\n2019<\/span><\/td>\n<\/tr>\n
Evidence for multiple ecological roles of Leptographium abietinum, a symbiotic fungus associated with the North American spruce beetle<\/a><\/p>\n
TS Davis, JE Stewart, A Mann, C Bradley, RW Hofstetter<\/div>\n
Fungal Ecology, https:\/\/doi.org\/10.1016\/j.funeco.2018.04<\/div>\n<\/td>\n
51<\/a><\/td>\n2018<\/span><\/td>\n<\/tr>\n
Engelmann spruce chemotypes in Colorado and their effects on symbiotic fungi associated with the North American spruce beetle<\/a><\/p>\n
TS Davis, FB Horne, JC Yetter, JE Stewart<\/div>\n
Journal of chemical ecology 44 (6), 601-610<\/div>\n<\/td>\n
24<\/a><\/td>\n2018<\/span><\/td>\n<\/tr>\n
The influence of prescribed crown fire on lodgepole pine dwarf mistletoe (Arceuthobium americanum<\/i>) populations 33\u00a0years post\u2010fire<\/a><\/p>\n
SM Ritter, CM Hoffman, JE Stewart, T Zimmerman<\/div>\n
Forest Pathology 48 (3), e12419<\/div>\n<\/td>\n
5<\/a><\/td>\n2018<\/span><\/td>\n<\/tr>\n
Drippy Blight, a Disease of Red Oaks in Colorado, U.S., Produced from the Combined Effect of the Scale Insect Allokermes galliformis and the Bacterium Lonsdalea quercina subsp\u00a0\u2026<\/a><\/p>\n
RA Sitz, MM Zerillo, J Snelling, JI Caballero, K Alexander, K Nash, …<\/div>\n
Arboriculture and Urban Forestry 44 (3), 146-152<\/div>\n<\/td>\n
<\/td>\n2018<\/span><\/td>\n<\/tr>\n
Drippy blight, a disease of red oaks in Colorado, US, produced from the combined effect of the scale insect Allokermes galliformis and the bacterium Lonsdalea quercina subsp\u00a0\u2026<\/a><\/p>\n
MM Zerillo, J Snelling, JI Caballero, K Alexander, K Nash, NA Tisserat, …<\/div>\n
Arboriculture and Urban Forestry. 43 (3): 146-153. 43 (3), 146-153<\/div>\n<\/td>\n
23<\/a><\/td>\n2018<\/span><\/td>\n<\/tr>\n
Molecular Genetic Approaches Toward Understanding Forest-Associated Fungi and Their Interactive Roles Within Forest Ecosystems<\/a><\/p>\n
JE Stewart, MS Kim, NB Klopfenstein<\/div>\n
Current Forestry Reports, 1-13<\/div>\n<\/td>\n
33<\/a><\/td>\n2018<\/span><\/td>\n<\/tr>\n
Genetic diversity of the myrtle rust pathogen (Austropuccinia psidii) in the Americas and Hawaii: Global implications for invasive threat assessments<\/a><\/p>\n
JE Stewart, AL Ross\u2010Davis, RN Gra\u04aba, AC Alfenas, TL Peever, …<\/div>\n
Forest Pathology<\/div>\n<\/td>\n
86<\/a><\/td>\n2018<\/span><\/td>\n<\/tr>\n
Virulence of Genetically Distinct\u00a0Geosmithia morbida<\/i>\u00a0Isolates to Black Walnut and Their Response to Coinoculation with\u00a0Fusarium solani<\/i><\/a><\/p>\n
RA Sitz, EK Luna, JI Caballero, NA Tisserat, WS Cranshaw, JE Stewart<\/div>\n
Plant Disease 101 (1), 116-120<\/div>\n<\/td>\n
20<\/a><\/td>\n2017<\/span><\/td>\n<\/tr>\n
Insights into the phylogeny of Northern Hemisphere\u00a0Armillaria<\/i>: Neighbor-net and Bayesian analyses of translation elongation factor 1-\u03b1 gene sequences<\/a><\/p>\n
NB Klopfenstein, JE Stewart, Y Ota, JW Hanna, BA Richardson, …<\/div>\n
Mycologia 109 (1), 75-91<\/div>\n<\/td>\n
57<\/a><\/td>\n2017<\/span><\/td>\n<\/tr>\n
Draft genome sequence of the fungus associated with oak wilt mortality in South Korea, Raffaelea quercus-mongolicae KACC44405. Genome Announc 5: e00797-17<\/a><\/p>\n
J Jeon, KT Kim, H Song, GW Lee, K Cheong, H Kim, G Choi, YH Lee, …<\/div>\n
<\/div>\n<\/td>\n
2<\/a><\/td>\n2017<\/span><\/td>\n<\/tr>\n
Draft Genome Sequence of the Fungus Associated with Oak-Wilt Mortality in South Korea, Raffaelea quercus-mongolicae KACC44405<\/a><\/p>\n
MSK Jongbum, J., K.-T. Kim., H.-J. Song, G.-W. Lee, K. Cheong, H. Kim, G …<\/div>\n
Genome Announcements 5 (e00829)<\/div>\n<\/td>\n
12<\/a><\/td>\n2017<\/span><\/td>\n<\/tr>\n
Impacts of lodgepole pine dwarf mistletoe (Arceuthobium americanum<\/i>) infestation on stand structure and fuel load in lodgepole pine dominated forests in central\u00a0\u2026<\/a><\/p>\n
SM Ritter, CM Hoffman, SA Ex, JE Stewart<\/div>\n
Botany 95 (3), 307-321<\/div>\n<\/td>\n
7<\/a><\/td>\n2017<\/span><\/td>\n<\/tr>\n
First Report of\u00a0Fusarium proliferatum<\/i>\u00a0Causing Fusarium Root Disease on Sugar Pine (Pinus lambertiana<\/i>) in a Forest Container Nursery in California<\/a><\/p>\n
JE Stewart, K Otto, GA Cline, RK Dumroese, NB Klopfenstein, MS Kim<\/div>\n
Plant Disease 100 (12), 2534-2534<\/div>\n<\/td>\n
10<\/a><\/td>\n2016<\/span><\/td>\n<\/tr>\n
Observed and anticipated impacts of drought on forest insects and diseases in the United States<\/a><\/p>\n
TE Kolb, CJ Fettig, MP Ayres, BJ Bentz, JA Hicke, R Mathiasen, …<\/div>\n
Forest Ecology and Management 380, 321-334<\/div>\n<\/td>\n
473<\/a><\/td>\n2016<\/span><\/td>\n<\/tr>\n
Two Horizontally Transferred Xenobiotic Resistance Gene Clusters Associated with Detoxification of Benzoxazolinones by\u00a0Fusarium<\/i>\u00a0Species<\/a><\/p>\n
AE Glenn, CB Davis, M Gao, SE Gold, TR Mitchell, RH Proctor, JE Stewart, …<\/div>\n
PloS one 11 (1), e0147486<\/div>\n<\/td>\n
59<\/a><\/td>\n2016<\/span><\/td>\n<\/tr>\n
Phylogenetic and population analyses of the brown root-rot pathogen (Phellinus noxius) highlight the existence of two distinct populations<\/a><\/p>\n
J Stewart, N Sahashi, T Hattori, Y Ota, L Shuey, R Schlub, N Atibalentia, …<\/div>\n
Phytopathology<\/div>\n<\/td>\n
1<\/a><\/td>\n2016<\/span><\/td>\n<\/tr>\n
Elevated Genetic Diversity in the Emerging Blueberry Pathogen\u00a0Exobasidium maculosum<\/i><\/a><\/p>\n
JE Stewart, K Brooks, PM Brannen, WO Cline, MT Brewer<\/div>\n
PLoS One 10 (7), e0132545<\/div>\n<\/td>\n
13<\/a><\/td>\n2015<\/span><\/td>\n<\/tr>\n
Evolutionary history and variation in host range of three Stagonosporopsis species causing gummy stem blight of cucurbits<\/a><\/p>\n
JE Stewart, NA Turner, MT Brewer<\/div>\n
Fungal Biology 119 (5), 370-382<\/div>\n<\/td>\n
117<\/a><\/td>\n2015<\/span><\/td>\n<\/tr>\n
Identification of a novel phylogenetic lineage of Alternaria alternata causing citrus brown spot in China<\/a><\/p>\n
F Huang, Y Fu, D Nie, JE Stewart, TL Peever, H Li<\/div>\n
Fungal Biology 119 (5), 320-330<\/div>\n<\/td>\n
66<\/a><\/td>\n2015<\/span><\/td>\n<\/tr>\n
Pathogenicity, Fungicide Resistance, and Genetic Variability of\u00a0Phytophthora rubi<\/i>\u00a0Isolates from Raspberry (Rubus idaeus<\/i>) in the Western United States<\/a><\/p>\n
JE Stewart, D Kroese, JF Tabima, MM Larsen, VJ Fieland, CM Press, …<\/div>\n
Plant Disease 98 (12), 1702-1708<\/div>\n<\/td>\n
31<\/a><\/td>\n2014<\/span><\/td>\n<\/tr>\n
RADseq: A population genomics tool to study the genetic diversity of Exobasidium sp., an emerging blueberry pathogen<\/a><\/p>\n
JE Stewart, T Glenn, MT Brewer<\/div>\n
Phytopathology 104 (11), 153-153<\/div>\n<\/td>\n
1<\/a><\/td>\n2014<\/span><\/td>\n<\/tr>\n
Gene clusters FDB1 and FDB2 in Fusarium verticillioides were acquired through multiple horizontal gene transfer events<\/a><\/p>\n
JE Stewart, Z Abdo, AE Glenn<\/div>\n
Phytopathology 104 (11), 114-114<\/div>\n<\/td>\n
2<\/a><\/td>\n2014<\/span><\/td>\n<\/tr>\n
Discord between morphological and phylogenetic species boundaries: incomplete lineage sorting and recombination results in fuzzy species boundaries in an asexual fungal pathogen<\/a><\/p>\n
JE Stewart, LW Timmer, CB Lawrence, BM Pryor, TL Peever<\/div>\n
BMC evolutionary Biology 14 (1), 38<\/div>\n<\/td>\n
122<\/a><\/td>\n2014<\/span><\/td>\n<\/tr>\n
Population history and pathways of spread of the plant pathogen Phytophthora plurivora<\/a><\/p>\n
CN Schoebel, J Stewart, NJ Gruenwald, D Rigling, S Prospero<\/div>\n
PLoS One 9 (1), e85368<\/div>\n<\/td>\n
111<\/a><\/td>\n2014<\/span><\/td>\n<\/tr>\n
Population History and Pathways of Spread of the Plant Pathogen Phytophthora<\/a><\/p>\n
CN Schoebel, J Stewart, NJ Gruenwald, D Rigling, S Prospero<\/div>\n
<\/div>\n<\/td>\n
1<\/a><\/td>\n2014<\/span><\/td>\n<\/tr>\n
Transcriptome of an A rmillaria root disease pathogen reveals candidate genes involved in host substrate utilization at the host\u2013pathogen interface<\/a><\/p>\n
AL Ross\u2010Davis, JE Stewart, JW Hanna, MS Kim, BJ Knaus, R Cronn, …<\/div>\n
Forest Pathology 43 (6), 468-477<\/div>\n<\/td>\n
60<\/a><\/td>\n2013<\/span><\/td>\n<\/tr>\n
Signatures of recombination in clonal lineages of the citrus brown spot pathogen, Alternaria alternata sensu lato<\/a><\/p>\n
JE Stewart, KA Thomas, CB Lawrence, H Dang, BM Pryor, LM Timmer, …<\/div>\n
Phytopathology 103 (7), 741-749<\/div>\n<\/td>\n
54<\/a><\/td>\n2013<\/span><\/td>\n<\/tr>\n
Development of sequence characterized amplified genomic regions (SCAR) for fungal systematics: proof of principle using\u00a0Alternaria<\/i>,\u00a0Ascochyta<\/i>\u00a0and\u00a0Tilletia<\/i><\/a><\/p>\n
JE Stewart, M Andrew, X Bao, MI Chilvers, LM Carris, TL Peever<\/div>\n
Mycologia 105 (4), 1077-1086<\/div>\n<\/td>\n
14<\/a><\/td>\n2013<\/span><\/td>\n<\/tr>\n
Isolation and detection of Phytophthora rubi in raspberry (Rubus idaeus) production in the western United States<\/a><\/p>\n
JE Stewart, D Kroese, V Fieland, IA Zasada, NJ Grunwald<\/div>\n
PHYTOPATHOLOGY 103 (6), 139-139<\/div>\n<\/td>\n
2<\/a><\/td>\n2013<\/span><\/td>\n<\/tr>\n
Metagenomic approaches for surveying forest soil microbial communities on permanent plots<\/a><\/p>\n
AL Ross-Davis, JE Stewart, JD Shaw, MS Kim, NB Klopfenstein<\/div>\n
Phytopathology 103 (6), 123-123<\/div>\n<\/td>\n
3<\/a><\/td>\n2013<\/span><\/td>\n<\/tr>\n
Armillaria phylogeny based on tef-1\u03b1 sequences suggests ongoing divergent speciation within the boreal floristic kingdom<\/a><\/p>\n
NB Klopfenstein, JW Hanna, AL Ross-Davis, JE Stewart, Y Ota, …<\/div>\n
compilers Proceedings of the 60th Annual Western International Forest\u00a0\u2026<\/div>\n<\/td>\n
3<\/a><\/td>\n2012<\/span><\/td>\n<\/tr>\n
Phylogenetic relationships among Northern Hemisphere Armillaria species based on the tef-1 alpha locus<\/a><\/p>\n
M Kim, JE Stewart, Y Ota, JW Hanna, AL Ross-Davis, NB Klopfenstein<\/div>\n
Phytopathology 102 (7), 63-64<\/div>\n<\/td>\n
5<\/a><\/td>\n2012<\/span><\/td>\n<\/tr>\n
Virulence of\u00a0Fusarium oxysporum<\/i>\u00a0and\u00a0F.\u00a0commune<\/i>\u00a0to Douglas\u2010fir (Pseudotsuga menziesii<\/i>) seedlings<\/a><\/p>\n
JE Stewart, Z Abdo, RK Dumroese, NB Klopfenstein, MS Kim<\/div>\n
Forest Pathology 42 (3), 220-228<\/div>\n<\/td>\n
52<\/a><\/td>\n2012<\/span><\/td>\n<\/tr>\n
Occurrence of the Root Rot Pathogen,\u00a0Fusarium commune<\/i>, in Forest Nurseries of?the Midwestern and Western United States<\/a><\/p>\n
MS Kim, JE Stewart, RK Dumroese, NB Klopfenstein<\/div>\n
Journal of Phytopathology 160 (2), 112-114<\/div>\n<\/td>\n
25<\/a><\/td>\n2012<\/span><\/td>\n<\/tr>\n
De novo assembly and transcriptome characterization of an Armillaria solidipes mycelial fan<\/a><\/p>\n
AL Ross-Davis, JE Stewart, JW Hanna, MS Kim, RC Cronn, HS Rai, …<\/div>\n
In: Zeglen, S.; Palacios, P., comps. Proceedings of 59th Annual Western\u00a0\u2026<\/div>\n<\/td>\n
3<\/a><\/td>\n2012<\/span><\/td>\n<\/tr>\n
Complete genome of the onion pathogen\u00a0Enterobacter cloacae<\/i>\u00a0EcWSU1<\/a><\/p>\n
JL Humann, M Wildung, CH Cheng, T Lee, JE Stewart, JC Drew, …<\/div>\n
Standards in genomic sciences 5 (3), 279-286<\/div>\n<\/td>\n
94<\/a><\/td>\n2011<\/span><\/td>\n<\/tr>\n
Evolutionary history and species boundaries of the citrus brown spot fungus<\/a><\/p>\n
J Stewart, H Ozkilinc, L Timmer, B Pryor, T Peever<\/div>\n
PHYTOPATHOLOGY 101 (6), S171-S171<\/div>\n<\/td>\n
1<\/a><\/td>\n2011<\/span><\/td>\n<\/tr>\n
How many species cause common and dwarf bunt of wheat?<\/a><\/p>\n
X Bao, J Stewart, L Carris<\/div>\n
Phytopathology 101 (6), S13-S13<\/div>\n<\/td>\n
4<\/a><\/td>\n2011<\/span><\/td>\n<\/tr>\n
Virulence of Fusarium root-disease pathogens (Fusarium oxysporum and F. commune) to Douglas-fir (Pseudotsuga menziesii)<\/a><\/p>\n
JE Stewart, Z Abdo, R Dumroese, NB Klopfenstein, M Kim<\/div>\n
PHYTOPATHOLOGY 101 (6), S171-S171<\/div>\n<\/td>\n
<\/td>\n2011<\/span><\/td>\n<\/tr>\n
Contrasting Codon Usage Patterns and Purifying Selection at the Mating Locus in Putatively Asexual\u00a0Alternaria<\/i>\u00a0Fungal Species<\/a><\/p>\n
JE Stewart, M Kawabe, Z Abdo, T Arie, TL Peever<\/div>\n
PLoS One 6 (5), e20083<\/div>\n<\/td>\n
29<\/a><\/td>\n2011<\/span><\/td>\n<\/tr>\n
Mating system and speciation of the citrus brown spot pathogen,\u00a0Alternaria alternata<\/i><\/a><\/p>\n
JE Stewart<\/div>\n
Washington State University<\/div>\n<\/td>\n
3<\/a><\/td>\n2011<\/span><\/td>\n<\/tr>\n
Identification and function of a polyketide synthase gene responsible for 1,8-dihydroxynaphthalene-melanin pigment biosynthesis in\u00a0Ascochyta rabiei<\/i><\/a><\/p>\n
HO Akamatsu, MI Chilvers, JE Stewart, TL Peever<\/div>\n
Current genetics 56 (4), 349-360<\/div>\n<\/td>\n
48<\/a><\/td>\n2010<\/span><\/td>\n<\/tr>\n
Purifying selection and biased codon usage at the mating locus in Alternaria<\/a><\/p>\n
JE Stewart, M Kawabe, T Arie, TL Peever<\/div>\n
Phytopathology 99 (6), S124-S125<\/div>\n<\/td>\n
1<\/a><\/td>\n2009<\/span><\/td>\n<\/tr>\n
Didymella pisi sp. nov., the teleomorph of Ascochyta pisi<\/a><\/p>\n
MI Chilvers, JD Rogers, FM Dugan, JE Stewart, W Chen, TL Peever<\/div>\n
Mycological research 113 (3), 391-400<\/div>\n<\/td>\n
89<\/a><\/td>\n2009<\/span><\/td>\n<\/tr>\n
Cloning and characterization of anonymous regions of Ascochyta lentis and a. Fabae genomes and suitability of these regions for phylogenetic analysis of Ascochyta species<\/a><\/p>\n
TL Peever, T Drader, EN Njambere, RN Attanayake, JE Stewart<\/div>\n
<\/div>\n<\/td>\n
<\/td>\n2009<\/span><\/td>\n<\/tr>\n
M.-S. \u041a\u0456\u043c\u00b9, GI MCDONALD\u00b9, TM RICE\u00b9, DE HALL\u00b9, JE STEWART\u00b2, JR TONN\u00b9, PJ ZAMBINO\u00b9 AND NB KLOPFENSTEIN\u00b9<\/a><\/p>\n
JRT STEWART<\/div>\n
Root and Butt Rots of Forest Trees: 12th International Conference on Root\u00a0\u2026<\/div>\n<\/td>\n
<\/td>\n2008<\/span><\/td>\n<\/tr>\n
Isolates of Alternaria alternata doubly pathogenic to rough lemon and tangerines<\/a><\/p>\n
SN Mondal, JE Stewart, TL Peever, LW Timmer<\/div>\n
PHYTOPATHOLOGY 97 (7), S79-S79<\/div>\n<\/td>\n
<\/td>\n2007<\/span><\/td>\n<\/tr>\n
Molecular characterization of Fusarium oxysporum and Fusarium commune isolates from a conifer nursery<\/a><\/p>\n
JE Stewart, MS Kim, RL James, RK Dumroese, NB Klopfenstein<\/div>\n
Phytopathology 96 (10), 1124-1133<\/div>\n<\/td>\n
108<\/a><\/td>\n2006<\/span><\/td>\n<\/tr>\n
Molecular characterization of Fusarium oxysporum and F-commune isolates collected from a conifer nursery<\/a><\/p>\n
JE Stewart, M Kim, RL James, R Dumroese, NB Klopfenstein<\/div>\n
PHYTOPATHOLOGY 96 (6), S111-S111<\/div>\n<\/td>\n
<\/td>\n2006<\/span><\/td>\n<\/tr>\n
Viability of Sirococcus clavigignenti-juglandacearum conidia in beetle fecal pellets<\/a><\/p>\n
S Halik, JE Stewart, DR Bergdahl<\/div>\n
Phytopathology 96 (6)<\/div>\n<\/td>\n
1<\/a><\/td>\n2006<\/span><\/td>\n<\/tr>\n
Root Disease Analyzer-Armillaria Response Tool (ART)<\/a><\/p>\n
GI McDonald, PD Tanamoto, TM Rice, DE Hall, JE Stewart, PJ Zambino, …<\/div>\n
Research Note RMRS RN-23-13-WWW. USDA Forest Service, Rocky Mountain\u00a0\u2026<\/div>\n<\/td>\n
3<\/a><\/td>\n2005<\/span><\/td>\n<\/tr>\n
Root diseases in coniferous forests of the Inland West: Potential implications of fuels treatments<\/a><\/p>\n
Rippy, Raini C, Stewart JE, Zambino, P, Klopfenstein, NB, Kim, M-S<\/div>\n
USDA Forest Service, Rocky Mountain Research Station<\/div>\n<\/td>\n
17<\/a><\/td>\n2005<\/span><\/td>\n<\/tr>\n
Fuels planning: Science synthesis and integration; environmental consequences fact sheet 13: Root Disease Analyzer-Armillaria Response Tool (ART)<\/a><\/p>\n
GI McDonald, PD Tanimoto, TM Rice, DE Hall, JE Stewart, PJ Zambino, …<\/div>\n
RMRS-RN-23-13. Fort Collins, CO: US Department of Agriculture, Rocky\u00a0\u2026<\/div>\n<\/td>\n
5<\/a><\/td>\n2005<\/span><\/td>\n<\/tr>\n
Viability of Sirococcus clavigignenti-juglandacearum conidia on exoskeletons of three coleopteran species<\/a><\/p>\n
JE Stewart, S Halik, DR Bergdahl<\/div>\n
Plant disease 88 (10), 1085-1091<\/div>\n<\/td>\n
12<\/a><\/td>\n2004<\/span><\/td>\n<\/tr>\n
Molecular characterization of Fusarium oxysporum from tree nurseries: Tools for early detection of pathogens<\/a><\/p>\n
JE Stewart, MS Kim, RL James, RK Dumroese, NB Klopfenstein<\/div>\n
Phytopathology 94 (6), S99-S99<\/div>\n<\/td>\n
5<\/a><\/td>\n2004<\/span><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n\n<\/div>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":4,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-533","page","type-page","status-publish","hentry"],"acf":[],"_links":{"self":[{"href":"https:\/\/labs.agsci.colostate.edu\/stewartlab\/wp-json\/wp\/v2\/pages\/533","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/labs.agsci.colostate.edu\/stewartlab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/labs.agsci.colostate.edu\/stewartlab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/labs.agsci.colostate.edu\/stewartlab\/wp-json\/wp\/v2\/users\/4"}],"replies":[{"embeddable":true,"href":"https:\/\/labs.agsci.colostate.edu\/stewartlab\/wp-json\/wp\/v2\/comments?post=533"}],"version-history":[{"count":2,"href":"https:\/\/labs.agsci.colostate.edu\/stewartlab\/wp-json\/wp\/v2\/pages\/533\/revisions"}],"predecessor-version":[{"id":564,"href":"https:\/\/labs.agsci.colostate.edu\/stewartlab\/wp-json\/wp\/v2\/pages\/533\/revisions\/564"}],"wp:attachment":[{"href":"https:\/\/labs.agsci.colostate.edu\/stewartlab\/wp-json\/wp\/v2\/media?parent=533"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}